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A straightforward and complete next-generation sequencing read simulator

Changes for 0.24 - 2023-07-31T12:53:42-03:00

  • When running 'sandy transcriptome' save transcript counts and gene counts into separated files
  • Use GNU/GSL RNG and Randist for randlux algorithm
  • Update db.sqlite3 with GTEXv8 expression patterns
  • Enable persistent storage of sandy db in docker
  • Uppercase all FASTA bases
  • Apply NNN blacklist filter